Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC004623.1-201ENST00000624592 2127 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AL353705.2-201ENST00000428243 662 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 HTR5BP-201ENST00000430851 1154 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AL592309.1-201ENST00000443127 649 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC005829.1-201ENST00000570002 483 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC099522.2-201ENST00000607001 744 ntBASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PCDHA4-204ENST00000618834 10557 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AC092028.1-202ENST00000641483 3547 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AC092028.1-201ENST00000641781 3540 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 USP17L6P-201ENST00000382470 1197 ntBASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.07□□□□□ -0.64
KCNIP4Q6PIL6 BAP1-211ENST00000615113 489 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms