Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 AC073548.1-201ENST00000624088 1882 ntBASIC13.54□□□□□ -0.24
CASP9P55211 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.54□□□□□ -0.24
CASP9P55211 PCDHA5-203ENST00000614258 4248 ntBASIC13.54□□□□□ -0.24
CASP9P55211 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.54□□□□□ -0.24
CASP9P55211 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.54□□□□□ -0.24
CASP9P55211 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.54□□□□□ -0.24
CASP9P55211 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.54□□□□□ -0.24
CASP9P55211 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP9P55211 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CASP9P55211 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.54□□□□□ -0.24
CASP9P55211 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 USP17L6P-201ENST00000382470 1197 ntBASIC13.53□□□□□ -0.24
CASP9P55211 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.53□□□□□ -0.24
CASP9P55211 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 RPL7P3-201ENST00000441388 714 ntBASIC13.53□□□□□ -0.24
CASP9P55211 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.53□□□□□ -0.24
CASP9P55211 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.53□□□□□ -0.24
CASP9P55211 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.53□□□□□ -0.24
CASP9P55211 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.53□□□□□ -0.24
CASP9P55211 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.53□□□□□ -0.24
CASP9P55211 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP9P55211 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CASP9P55211 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP9P55211 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP9P55211 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CASP9P55211 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CASP9P55211 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.52□□□□□ -0.24
CASP9P55211 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CASP9P55211 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP9P55211 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP9P55211 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CASP9P55211 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CASP9P55211 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.52□□□□□ -0.25
CASP9P55211 AL645933.1-201ENST00000440087 609 ntBASIC13.52□□□□□ -0.25
CASP9P55211 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.52□□□□□ -0.25
CASP9P55211 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CASP9P55211 DUX4L46-201ENST00000566845 751 ntBASIC13.52□□□□□ -0.25
CASP9P55211 MIR4783-201ENST00000580343 82 ntBASIC13.52□□□□□ -0.25
CASP9P55211 AC132192.2-201ENST00000596206 1147 ntBASIC13.52□□□□□ -0.25
CASP9P55211 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.52□□□□□ -0.25
CASP9P55211 AC008825.2-201ENST00000603374 718 ntBASIC13.52□□□□□ -0.25
CASP9P55211 MIR6720-201ENST00000611664 98 ntBASIC13.52□□□□□ -0.25
CASP9P55211 MIR6805-201ENST00000615055 62 ntBASIC13.52□□□□□ -0.25
CASP9P55211 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms