Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ABCD1P2-201ENST00000429313 1601 ntBASIC15.64■□□□□ 0.09
PMS1P54277 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PMS1P54277 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.63■□□□□ 0.09
PMS1P54277 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 AC090164.2-201ENST00000611487 516 ntBASIC15.63■□□□□ 0.09
PMS1P54277 AC004923.1-202ENST00000642106 209 ntBASIC15.63■□□□□ 0.09
PMS1P54277 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 AL590824.1-201ENST00000403828 1349 ntBASIC15.63■□□□□ 0.09
PMS1P54277 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PMS1P54277 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PMS1P54277 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.63■□□□□ 0.09
PMS1P54277 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 BRD7P5-201ENST00000299197 1822 ntBASIC15.62■□□□□ 0.09
PMS1P54277 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PMS1P54277 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.62■□□□□ 0.09
PMS1P54277 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PMS1P54277 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 POM121L10P-201ENST00000436994 1285 ntBASIC15.62■□□□□ 0.09
PMS1P54277 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.62■□□□□ 0.09
PMS1P54277 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 AC104982.3-201ENST00000581995 514 ntBASIC15.62■□□□□ 0.09
PMS1P54277 MIR3615-201ENST00000581999 87 ntBASIC15.62■□□□□ 0.09
PMS1P54277 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.62■□□□□ 0.09
PMS1P54277 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.62■□□□□ 0.09
PMS1P54277 AC007663.3-201ENST00000609632 465 ntBASIC15.62■□□□□ 0.09
PMS1P54277 AL157813.1-201ENST00000612996 587 ntBASIC15.62■□□□□ 0.09
PMS1P54277 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms