Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 BRWD1P1-201ENST00000401091 371 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.06□□□□□ -0.32
NR4A2P43354 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 AL355994.2-201ENST00000447882 704 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.06□□□□□ -0.32
NR4A2P43354 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.06□□□□□ -0.32
NR4A2P43354 FTH1P14-201ENST00000482930 551 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AC026410.3-201ENST00000514280 936 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.06□□□□□ -0.32
NR4A2P43354 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 FAM8A2P-201ENST00000528813 1142 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.06□□□□□ -0.32
NR4A2P43354 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.06□□□□□ -0.32
NR4A2P43354 AC079316.1-201ENST00000548397 411 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.06□□□□□ -0.32
NR4A2P43354 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 AC093813.1-201ENST00000605066 256 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 AC025181.2-201ENST00000606994 802 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 TUBB1P2-201ENST00000422712 1306 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 TUBB1P1-201ENST00000503144 1300 ntBASIC13.06□□□□□ -0.32
NR4A2P43354 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NR4A2P43354 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.06□□□□□ -0.32
NR4A2P43354 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 AC026992.2-203ENST00000563004 2419 ntBASIC13.05□□□□□ -0.32
NR4A2P43354 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.05□□□□□ -0.32
NR4A2P43354 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NR4A2P43354 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.05□□□□□ -0.32
NR4A2P43354 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.05□□□□□ -0.32
NR4A2P43354 ACKR1-201ENST00000368121 1240 ntBASIC13.05□□□□□ -0.32
NR4A2P43354 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NR4A2P43354 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A2P43354 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A2P43354 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A2P43354 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NR4A2P43354 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms