Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 RNA5SP84-201ENST00000364740 107 ntBASIC18■□□□□ 0.47
RXRBP28702 MARCKSL1P2-201ENST00000401037 976 ntBASIC18■□□□□ 0.47
RXRBP28702 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC18■□□□□ 0.47
RXRBP28702 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC18■□□□□ 0.47
RXRBP28702 AC006987.4-201ENST00000430032 279 ntBASIC18■□□□□ 0.47
RXRBP28702 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC18■□□□□ 0.47
RXRBP28702 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC18■□□□□ 0.47
RXRBP28702 HNRNPA1P30-202ENST00000440699 997 ntBASIC18■□□□□ 0.47
RXRBP28702 TULP3P1-202ENST00000453253 1291 ntBASIC18■□□□□ 0.47
RXRBP28702 RN7SL76P-201ENST00000482435 289 ntBASIC18■□□□□ 0.47
RXRBP28702 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC18■□□□□ 0.47
RXRBP28702 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC18■□□□□ 0.47
RXRBP28702 AC104759.1-201ENST00000559109 939 ntBASIC18■□□□□ 0.47
RXRBP28702 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18■□□□□ 0.47
RXRBP28702 RN7SL162P-201ENST00000579233 292 ntBASIC18■□□□□ 0.47
RXRBP28702 CYP4F10P-201ENST00000589560 752 ntBASIC18■□□□□ 0.47
RXRBP28702 AP006621.5-202ENST00000623692 636 ntBASIC18■□□□□ 0.47
RXRBP28702 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC18■□□□□ 0.47
RXRBP28702 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18■□□□□ 0.47
RXRBP28702 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18■□□□□ 0.47
RXRBP28702 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RXRBP28702 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 AL590824.1-201ENST00000403828 1349 ntBASIC17.99■□□□□ 0.47
RXRBP28702 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RXRBP28702 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 AL513477.1-201ENST00000602865 2407 ntBASIC17.99■□□□□ 0.47
RXRBP28702 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RXRBP28702 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC17.99■□□□□ 0.47
RXRBP28702 AC006001.3-205ENST00000428370 579 ntBASIC17.99■□□□□ 0.47
RXRBP28702 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 AC116347.1-201ENST00000442824 720 ntBASIC17.99■□□□□ 0.47
RXRBP28702 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.99■□□□□ 0.47
RXRBP28702 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RXRBP28702 AC007992.1-201ENST00000513953 953 ntBASIC17.99■□□□□ 0.47
RXRBP28702 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC17.99■□□□□ 0.47
RXRBP28702 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC17.99■□□□□ 0.47
RXRBP28702 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC17.99■□□□□ 0.47
RXRBP28702 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC17.99■□□□□ 0.47
RXRBP28702 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC17.99■□□□□ 0.47
RXRBP28702 SNORA50D-202ENST00000627561 132 ntBASIC17.99■□□□□ 0.47
RXRBP28702 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 KRT8P42-201ENST00000405771 1399 ntBASIC17.99■□□□□ 0.47
RXRBP28702 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC17.99■□□□□ 0.47
RXRBP28702 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
RXRBP28702 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RXRBP28702 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RXRBP28702 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.98■□□□□ 0.47
RXRBP28702 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.98■□□□□ 0.47
RXRBP28702 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RXRBP28702 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RXRBP28702 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RXRBP28702 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.98■□□□□ 0.47
RXRBP28702 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC17.98■□□□□ 0.47
RXRBP28702 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC17.98■□□□□ 0.47
RXRBP28702 KRT18P15-201ENST00000458108 1291 ntBASIC17.98■□□□□ 0.47
RXRBP28702 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RXRBP28702 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RXRBP28702 AL355075.5-201ENST00000553568 890 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms