Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 MTX1P1-201ENST00000440904 838 ntBASIC12.22□□□□□ -0.45
CCL1P22362 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL1P22362 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL1P22362 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL1P22362 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 MIR6775-201ENST00000617557 69 ntBASIC12.22□□□□□ -0.45
CCL1P22362 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 AC093462.1-201ENST00000621167 1683 ntBASIC12.22□□□□□ -0.45
CCL1P22362 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 AL365181.3-201ENST00000605886 3222 ntBASIC12.22□□□□□ -0.45
CCL1P22362 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL1P22362 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCL1P22362 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL1P22362 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCL1P22362 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL1P22362 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL1P22362 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 AL035633.1-201ENST00000406139 838 ntBASIC12.21□□□□□ -0.45
CCL1P22362 MIR663B-201ENST00000408361 115 ntBASIC12.21□□□□□ -0.45
CCL1P22362 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL1P22362 COX20P2-201ENST00000452636 358 ntBASIC12.21□□□□□ -0.45
CCL1P22362 EIF4HP1-201ENST00000453115 687 ntBASIC12.21□□□□□ -0.45
CCL1P22362 RNMTL1P1-201ENST00000454103 560 ntBASIC12.21□□□□□ -0.45
CCL1P22362 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL1P22362 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL1P22362 AC021723.1-201ENST00000486306 515 ntBASIC12.21□□□□□ -0.45
CCL1P22362 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CCL1P22362 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 AC022748.3-201ENST00000621828 275 ntBASIC12.21□□□□□ -0.45
CCL1P22362 AL161773.1-201ENST00000624845 863 ntBASIC12.21□□□□□ -0.45
CCL1P22362 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL1P22362 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL1P22362 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL1P22362 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL1P22362 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCL1P22362 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms