Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC130709.1-201ENST00000484779 1212 ntBASIC11.17□□□□□ -0.62
CD28P10747 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 POLD4-208ENST00000532830 904 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 MT3-203ENST00000565838 421 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.17□□□□□ -0.62
CD28P10747 AC084781.1-201ENST00000613737 656 ntBASIC11.17□□□□□ -0.62
CD28P10747 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 AC090386.2-201ENST00000623010 1039 ntBASIC11.17□□□□□ -0.62
CD28P10747 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.17□□□□□ -0.62
CD28P10747 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
CD28P10747 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
CD28P10747 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
CD28P10747 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 AL354702.1-201ENST00000442006 1960 ntBASIC11.16□□□□□ -0.62
CD28P10747 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CD28P10747 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
CD28P10747 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 OR8T1P-201ENST00000421347 918 ntBASIC11.16□□□□□ -0.62
CD28P10747 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC11.16□□□□□ -0.62
CD28P10747 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 RPL18AP3-201ENST00000462885 528 ntBASIC11.16□□□□□ -0.62
CD28P10747 RN7SL818P-201ENST00000485099 259 ntBASIC11.16□□□□□ -0.62
CD28P10747 ORAOV1P1-201ENST00000503108 395 ntBASIC11.16□□□□□ -0.62
CD28P10747 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.16□□□□□ -0.62
CD28P10747 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 AP003398.1-201ENST00000531124 318 ntBASIC11.16□□□□□ -0.62
CD28P10747 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC11.16□□□□□ -0.62
CD28P10747 AC138701.2-201ENST00000553634 226 ntBASIC11.16□□□□□ -0.62
CD28P10747 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
CD28P10747 DNM1P30-201ENST00000563586 452 ntBASIC11.16□□□□□ -0.62
CD28P10747 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 MIR4649-201ENST00000582839 64 ntBASIC11.16□□□□□ -0.62
CD28P10747 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 RN7SL725P-201ENST00000606439 259 ntBASIC11.16□□□□□ -0.62
CD28P10747 AC009084.3-201ENST00000623356 437 ntBASIC11.16□□□□□ -0.62
CD28P10747 AC073911.3-201ENST00000624401 631 ntBASIC11.16□□□□□ -0.62
CD28P10747 AC005618.3-201ENST00000624928 458 ntBASIC11.16□□□□□ -0.62
CD28P10747 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
CD28P10747 LAP3P2-201ENST00000454686 1454 ntBASIC11.16□□□□□ -0.62
CD28P10747 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
CD28P10747 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
CD28P10747 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms