Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 OR8T1P-201ENST00000421347 918 ntBASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AC092638.2-201ENST00000441105 947 ntBASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AC018638.5-201ENST00000450885 754 ntBASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ALG1L13P-202ENST00000519320 584 ntBASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40ALP0C0E4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AC010327.5-201ENST00000586923 3061 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 HIST2H2BA-201ENST00000412169 381 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 GUSBP10-201ENST00000417412 665 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AC098934.1-203ENST00000442868 1262 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AL354861.1-201ENST00000445213 355 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AP003398.1-201ENST00000531124 318 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 RN7SL470P-201ENST00000583069 259 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40ALP0C0E4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms