Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
MYCNP04198 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
MYCNP04198 OR13D1-201ENST00000318763 1107 ntBASIC17.13■□□□□ 0.33
MYCNP04198 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 MIR33B-201ENST00000385104 96 ntBASIC17.13■□□□□ 0.33
MYCNP04198 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 HIST2H2BB-201ENST00000449108 381 ntBASIC17.13■□□□□ 0.33
MYCNP04198 DUTP3-201ENST00000450025 415 ntBASIC17.13■□□□□ 0.33
MYCNP04198 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC17.13■□□□□ 0.33
MYCNP04198 AC004066.1-201ENST00000502488 802 ntBASIC17.13■□□□□ 0.33
MYCNP04198 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 AL391280.1-201ENST00000506969 1062 ntBASIC17.13■□□□□ 0.33
MYCNP04198 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 AC090819.1-201ENST00000523800 1111 ntBASIC17.13■□□□□ 0.33
MYCNP04198 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC17.13■□□□□ 0.33
MYCNP04198 MIR3907-201ENST00000579424 151 ntBASIC17.13■□□□□ 0.33
MYCNP04198 RN7SL713P-201ENST00000582127 302 ntBASIC17.13■□□□□ 0.33
MYCNP04198 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC17.13■□□□□ 0.33
MYCNP04198 AC092192.1-201ENST00000633154 1018 ntBASIC17.13■□□□□ 0.33
MYCNP04198 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MYCNP04198 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MYCNP04198 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MYCNP04198 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.13■□□□□ 0.33
MYCNP04198 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.13■□□□□ 0.33
MYCNP04198 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MYCNP04198 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.12■□□□□ 0.33
MYCNP04198 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MYCNP04198 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.12■□□□□ 0.33
MYCNP04198 AC093829.1-201ENST00000506662 1618 ntBASIC17.12■□□□□ 0.33
MYCNP04198 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MYCNP04198 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 EEF1DP6-201ENST00000449232 372 ntBASIC17.12■□□□□ 0.33
MYCNP04198 RNMTL1P1-201ENST00000454103 560 ntBASIC17.12■□□□□ 0.33
MYCNP04198 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
MYCNP04198 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 AC027216.1-201ENST00000577726 685 ntBASIC17.12■□□□□ 0.33
MYCNP04198 AP005136.1-201ENST00000579765 429 ntBASIC17.12■□□□□ 0.33
MYCNP04198 AC104564.6-201ENST00000582881 1052 ntBASIC17.12■□□□□ 0.33
MYCNP04198 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.12■□□□□ 0.33
MYCNP04198 AC073413.1-201ENST00000603927 732 ntBASIC17.12■□□□□ 0.33
MYCNP04198 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.12■□□□□ 0.33
MYCNP04198 AL035661.1-201ENST00000620459 1144 ntBASIC17.12■□□□□ 0.33
MYCNP04198 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MYCNP04198 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms