Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.75□□□□□ -0.37
CNOT4O95628 TSPY25P-201ENST00000429463 745 ntBASIC12.75□□□□□ -0.37
CNOT4O95628 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 OR2R1P-201ENST00000441404 914 ntBASIC12.75□□□□□ -0.37
CNOT4O95628 EEF1DP6-201ENST00000449232 372 ntBASIC12.75□□□□□ -0.37
CNOT4O95628 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 AC024681.1-201ENST00000521917 487 ntBASIC12.75□□□□□ -0.37
CNOT4O95628 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.75□□□□□ -0.37
CNOT4O95628 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.75□□□□□ -0.37
CNOT4O95628 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.75□□□□□ -0.37
CNOT4O95628 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.75□□□□□ -0.37
CNOT4O95628 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 AC079336.7-201ENST00000623428 1078 ntBASIC12.75□□□□□ -0.37
CNOT4O95628 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.75□□□□□ -0.37
CNOT4O95628 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 AC140479.7-201ENST00000636301 2332 ntBASIC12.74□□□□□ -0.37
CNOT4O95628 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 AC015802.1-201ENST00000588104 1449 ntBASIC12.74□□□□□ -0.37
CNOT4O95628 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
CNOT4O95628 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.74□□□□□ -0.37
CNOT4O95628 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.74□□□□□ -0.37
CNOT4O95628 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.74□□□□□ -0.37
CNOT4O95628 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.74□□□□□ -0.37
CNOT4O95628 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 AL137784.3-201ENST00000623858 2288 ntBASIC12.74□□□□□ -0.37
CNOT4O95628 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CNOT4O95628 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms