Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 AL512430.1-201ENST00000392575 860 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.74□□□□□ -0.37
ZIC3O60481 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 FTLP1-201ENST00000449155 526 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 FGFR3P1-201ENST00000449999 601 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 MRPL22P1-201ENST00000505398 616 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.74□□□□□ -0.37
ZIC3O60481 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.74□□□□□ -0.37
ZIC3O60481 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 AP001184.1-201ENST00000637936 376 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 KRT8P18-201ENST00000413425 1445 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 AP000356.3-201ENST00000382243 753 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.73□□□□□ -0.37
ZIC3O60481 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.73□□□□□ -0.37
ZIC3O60481 AC018638.5-201ENST00000450885 754 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 RN7SL788P-201ENST00000460504 316 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 CHCHD2P9-201ENST00000461726 456 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 RN7SL81P-201ENST00000493781 261 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ZIC3O60481 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ZIC3O60481 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.73□□□□□ -0.37
ZIC3O60481 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 SBF1P1-201ENST00000444527 5631 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 AGAP10P-201ENST00000454844 2418 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.73□□□□□ -0.37
ZIC3O60481 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZIC3O60481 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.73□□□□□ -0.37
ZIC3O60481 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZIC3O60481 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms