Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 MAPK10-262ENST00000641051 5738 ntBASIC17.56■□□□□ 0.4
UPF2Q9HAU5 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.56■□□□□ 0.4
UPF2Q9HAU5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AC145423.3-201ENST00000615987 467 ntBASIC17.56■□□□□ 0.4
UPF2Q9HAU5 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AC005014.1-201ENST00000432006 2976 ntBASIC17.56■□□□□ 0.4
UPF2Q9HAU5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 PCDHA6-201ENST00000378126 3267 ntBASIC17.55■□□□□ 0.4
UPF2Q9HAU5 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 CR392039.2-201ENST00000623182 509 ntBASIC17.55■□□□□ 0.4
UPF2Q9HAU5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 LINC00567-201ENST00000569854 3409 ntBASIC17.55■□□□□ 0.4
UPF2Q9HAU5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
UPF2Q9HAU5 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AL445250.1-201ENST00000641671 2259 ntBASIC17.54■□□□□ 0.4
UPF2Q9HAU5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC087499.6-201ENST00000411576 835 ntBASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC098850.1-201ENST00000419919 790 ntBASIC17.54■□□□□ 0.4
UPF2Q9HAU5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPF2Q9HAU5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms