Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-CQ95604 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-CQ95604 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-CQ95604 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HLA-CQ95604 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
HLA-CQ95604 CRIP1P2-201ENST00000425396 228 ntBASIC14.48□□□□□ -0.09
HLA-CQ95604 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-CQ95604 AC233724.9-201ENST00000511694 407 ntBASIC14.48□□□□□ -0.09
HLA-CQ95604 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.48□□□□□ -0.09
HLA-CQ95604 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-CQ95604 AC133555.4-201ENST00000569081 152 ntBASIC14.48□□□□□ -0.09
HLA-CQ95604 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 RN7SL300P-201ENST00000582522 318 ntBASIC14.48□□□□□ -0.09
HLA-CQ95604 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-CQ95604 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-CQ95604 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-CQ95604 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 ACE3P-201ENST00000423435 1973 ntBASIC14.47□□□□□ -0.09
HLA-CQ95604 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-CQ95604 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 MIR1226-201ENST00000408658 75 ntBASIC14.47□□□□□ -0.09
HLA-CQ95604 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 EEF1DP2-201ENST00000433698 843 ntBASIC14.47□□□□□ -0.09
HLA-CQ95604 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 PHBP18-201ENST00000546648 813 ntBASIC14.47□□□□□ -0.09
HLA-CQ95604 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-CQ95604 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-CQ95604 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
HLA-CQ95604 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-CQ95604 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms