Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 BCRP1-201ENST00000444246 691 ntBASIC12.43□□□□□ -0.42
CCDC107Q8WV48 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AC138761.1-201ENST00000584393 385 ntBASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AL033527.5-201ENST00000641382 801 ntBASIC12.43□□□□□ -0.42
CCDC107Q8WV48 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AC015688.4-201ENST00000580780 1647 ntBASIC12.43□□□□□ -0.42
CCDC107Q8WV48 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ACKR1-201ENST00000368121 1240 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 PIN1P1-201ENST00000412108 996 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC136604.1-202ENST00000425471 771 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC190387.1-201ENST00000551683 408 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AC140912.1-201ENST00000577171 1054 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AL096865.1-201ENST00000606796 927 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 AL603764.1-201ENST00000636452 321 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 MSTO2P-201ENST00000314835 1709 ntBASIC12.42□□□□□ -0.42
CCDC107Q8WV48 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCDC107Q8WV48 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms