Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC103592.1-201ENST00000394513 664 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FAM8A2P-201ENST00000528813 1142 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 KRT18P8-201ENST00000581937 1246 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC090164.2-201ENST00000611487 516 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC091271.1-201ENST00000611877 1162 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AL136295.7-201ENST00000619226 1200 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC068587.8-201ENST00000641239 219 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TUBB1P2-201ENST00000422712 1306 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TUBB1P1-201ENST00000503144 1300 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 AC104073.2-201ENST00000453737 312 ntBASIC13.35□□□□□ -0.27
NUP43Q8NFH3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LINC00115-201ENST00000473798 1317 ntBASIC13.35□□□□□ -0.27
NUP43Q8NFH3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP43Q8NFH3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.34□□□□□ -0.27
NUP43Q8NFH3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms