Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 RNA5SP359-201ENST00000364838 113 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC006335.1-201ENST00000445200 547 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC116345.2-201ENST00000512837 523 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 AC021016.3-201ENST00000608367 477 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 FRMPD2B-201ENST00000431305 1347 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFWD3Q6PCD5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AC090505.1-201ENST00000430515 1834 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AC092580.1-201ENST00000433998 658 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 RTN3P1-201ENST00000536295 711 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 RHOQP1-201ENST00000555758 579 ntBASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFWD3Q6PCD5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms