Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RIF1Q5UIP0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RIF1Q5UIP0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RIF1Q5UIP0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RIF1Q5UIP0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.55□□□□□ -0.24
RIF1Q5UIP0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 CCT8L1P-201ENST00000465400 1674 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC137723.2-201ENST00000623540 398 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC015909.5-201ENST00000624336 2266 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 SERPINB8P1-201ENST00000401898 377 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AP001331.1-201ENST00000413008 1015 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC139143.1-201ENST00000441772 1207 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC091905.3-201ENST00000624959 234 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 AC002350.2-201ENST00000623894 1828 ntBASIC13.54□□□□□ -0.24
RIF1Q5UIP0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RIF1Q5UIP0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 NOS2P3-201ENST00000411468 867 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 NOS2P2-201ENST00000426269 867 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC008267.3-201ENST00000448776 712 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC124944.3-201ENST00000607976 1304 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 MROH4P-201ENST00000431302 1578 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 IMPDH1P5-201ENST00000439688 1540 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CLK2P1-201ENST00000416636 1294 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms