Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.69□□□□□ -0.38
EFNB1P98172 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.69□□□□□ -0.38
EFNB1P98172 AC112492.5-201ENST00000421897 457 ntBASIC12.69□□□□□ -0.38
EFNB1P98172 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 CNN2P10-201ENST00000443067 918 ntBASIC12.69□□□□□ -0.38
EFNB1P98172 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.69□□□□□ -0.38
EFNB1P98172 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.69□□□□□ -0.38
EFNB1P98172 AC100850.1-201ENST00000506768 649 ntBASIC12.69□□□□□ -0.38
EFNB1P98172 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.69□□□□□ -0.38
EFNB1P98172 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 KRT90P-201ENST00000549264 1064 ntBASIC12.69□□□□□ -0.38
EFNB1P98172 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.69□□□□□ -0.38
EFNB1P98172 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.69□□□□□ -0.38
EFNB1P98172 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.69□□□□□ -0.38
EFNB1P98172 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 AC093462.1-201ENST00000621167 1683 ntBASIC12.69□□□□□ -0.38
EFNB1P98172 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
EFNB1P98172 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
EFNB1P98172 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
EFNB1P98172 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.69□□□□□ -0.38
EFNB1P98172 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 LINC00567-201ENST00000569854 3409 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 AC236430.1-201ENST00000402231 743 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.68□□□□□ -0.38
EFNB1P98172 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.68□□□□□ -0.38
EFNB1P98172 AC007389.4-201ENST00000454674 793 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 RN7SL837P-201ENST00000463010 287 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.68□□□□□ -0.38
EFNB1P98172 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
EFNB1P98172 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 AL160314.3-201ENST00000556041 767 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 AC015936.2-201ENST00000593177 259 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 AP002353.1-201ENST00000528257 1599 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
EFNB1P98172 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.68□□□□□ -0.38
EFNB1P98172 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.68□□□□□ -0.38
EFNB1P98172 VENTXP1-201ENST00000569334 2716 ntBASIC12.68□□□□□ -0.38
EFNB1P98172 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.67□□□□□ -0.38
EFNB1P98172 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
EFNB1P98172 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.67□□□□□ -0.38
EFNB1P98172 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.67□□□□□ -0.38
EFNB1P98172 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
EFNB1P98172 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms