Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC093106.1-201ENST00000437271 352 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 AC007679.1-201ENST00000458609 502 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 RN7SL838P-201ENST00000481676 295 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 FAM86JP-202ENST00000484500 988 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 RN7SL300P-201ENST00000582522 318 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 BX322562.1-201ENST00000617004 561 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 AC026336.4-201ENST00000624565 1050 ntBASIC16.6■□□□□ 0.25
CNTNAP1P78357 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CNTNAP1P78357 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNTNAP1P78357 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 LILRP2-202ENST00000413572 1383 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 USP17L6P-201ENST00000382470 1197 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 FTH1P18-201ENST00000412071 549 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 ZNF877P-201ENST00000437614 612 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 RN7SL523P-201ENST00000484401 298 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 NAT9-204ENST00000578822 839 ntTSL 3 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 AC126755.5-201ENST00000622756 267 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 AC012617.1-204ENST00000586340 2305 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 HSPA8P5-201ENST00000456928 2069 ntBASIC16.59■□□□□ 0.25
CNTNAP1P78357 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNTNAP1P78357 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CNTNAP1P78357 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CNTNAP1P78357 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP1P78357 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP1P78357 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP1P78357 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP1P78357 AL139158.3-201ENST00000641212 1562 ntBASIC16.58■□□□□ 0.25
CNTNAP1P78357 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CNTNAP1P78357 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNTNAP1P78357 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 ASS1P1-201ENST00000402854 1237 ntBASIC16.58■□□□□ 0.24
CNTNAP1P78357 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 AC099328.1-201ENST00000498809 1030 ntBASIC16.58■□□□□ 0.24
CNTNAP1P78357 CCNL2P1-201ENST00000512846 969 ntBASIC16.58■□□□□ 0.24
CNTNAP1P78357 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.58■□□□□ 0.24
CNTNAP1P78357 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms