Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN6P56747 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDN6P56747 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN6P56747 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN6P56747 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN6P56747 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC140658.4-201ENST00000561990 352 ntBASIC13.63□□□□□ -0.23
CLDN6P56747 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDN6P56747 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CLDN6P56747 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CLDN6P56747 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDN6P56747 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDN6P56747 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 LAP3P2-201ENST00000454686 1454 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN6P56747 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN6P56747 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLDN6P56747 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLDN6P56747 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 OR52M2P-201ENST00000414298 959 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 OR51A9P-201ENST00000422578 911 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.62□□□□□ -0.23
CLDN6P56747 HLA-DPA2-205ENST00000433582 733 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 AC005740.1-201ENST00000515639 522 ntBASIC13.62□□□□□ -0.23
CLDN6P56747 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.62□□□□□ -0.23
CLDN6P56747 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.62□□□□□ -0.23
CLDN6P56747 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDN6P56747 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLDN6P56747 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.62□□□□□ -0.23
CLDN6P56747 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDN6P56747 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDN6P56747 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN6P56747 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms