Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.71□□□□□ -0.37
GFRA1P56159 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
GFRA1P56159 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.71□□□□□ -0.37
GFRA1P56159 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.71□□□□□ -0.37
GFRA1P56159 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.71□□□□□ -0.37
GFRA1P56159 AC073352.2-201ENST00000609385 439 ntBASIC12.71□□□□□ -0.37
GFRA1P56159 AC084781.1-201ENST00000613737 656 ntBASIC12.71□□□□□ -0.37
GFRA1P56159 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.71□□□□□ -0.37
GFRA1P56159 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.71□□□□□ -0.37
GFRA1P56159 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GFRA1P56159 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.71□□□□□ -0.37
GFRA1P56159 AC005089.1-201ENST00000619486 2241 ntBASIC12.71□□□□□ -0.37
GFRA1P56159 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.71□□□□□ -0.37
GFRA1P56159 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.71□□□□□ -0.37
GFRA1P56159 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
GFRA1P56159 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.71□□□□□ -0.38
GFRA1P56159 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
GFRA1P56159 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.71□□□□□ -0.38
GFRA1P56159 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 KRT8P43-201ENST00000406052 1458 ntBASIC12.71□□□□□ -0.38
GFRA1P56159 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.71□□□□□ -0.38
GFRA1P56159 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 KRT8P18-201ENST00000413425 1445 ntBASIC12.71□□□□□ -0.38
GFRA1P56159 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
GFRA1P56159 AC068760.1-201ENST00000493579 1953 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
GFRA1P56159 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 ERP29P1-201ENST00000442902 706 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.7□□□□□ -0.38
GFRA1P56159 RN7SL181P-201ENST00000462921 277 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC095040.1-201ENST00000513286 675 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
GFRA1P56159 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.7□□□□□ -0.38
GFRA1P56159 MIR4706-201ENST00000582134 82 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 MIR2392-201ENST00000584881 84 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC092171.5-201ENST00000608012 942 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 AC018635.2-201ENST00000608625 364 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 AC007881.3-201ENST00000608897 607 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 AC087392.5-201ENST00000612517 489 ntBASIC12.7□□□□□ -0.38
GFRA1P56159 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.7□□□□□ -0.38
GFRA1P56159 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
GFRA1P56159 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.7□□□□□ -0.38
GFRA1P56159 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.7□□□□□ -0.38
GFRA1P56159 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
GFRA1P56159 AC097376.2-205ENST00000610159 5334 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.69□□□□□ -0.38
GFRA1P56159 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms