Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
BRCA2P51587 AC012513.2-201ENST00000441511 1137 ntBASIC15.33■□□□□ 0.04
BRCA2P51587 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC15.33■□□□□ 0.04
BRCA2P51587 AC009517.1-201ENST00000454750 570 ntBASIC15.33■□□□□ 0.04
BRCA2P51587 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.33■□□□□ 0.04
BRCA2P51587 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC15.33■□□□□ 0.04
BRCA2P51587 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.33■□□□□ 0.04
BRCA2P51587 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.33■□□□□ 0.04
BRCA2P51587 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.33■□□□□ 0.04
BRCA2P51587 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC15.33■□□□□ 0.04
BRCA2P51587 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.33■□□□□ 0.04
BRCA2P51587 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.33■□□□□ 0.04
BRCA2P51587 AC138392.1-201ENST00000427577 921 ntBASIC15.33■□□□□ 0.04
BRCA2P51587 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC15.33■□□□□ 0.04
BRCA2P51587 AC015818.1-201ENST00000451011 244 ntBASIC15.33■□□□□ 0.04
BRCA2P51587 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC15.33■□□□□ 0.04
BRCA2P51587 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.33■□□□□ 0.04
BRCA2P51587 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BRCA2P51587 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.32■□□□□ 0.04
BRCA2P51587 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.32■□□□□ 0.04
BRCA2P51587 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC15.32■□□□□ 0.04
BRCA2P51587 PCTP-206ENST00000573500 919 ntTSL 3 BASIC15.32■□□□□ 0.04
BRCA2P51587 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC15.32■□□□□ 0.04
BRCA2P51587 AC091691.1-201ENST00000583587 1018 ntBASIC15.32■□□□□ 0.04
BRCA2P51587 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRCA2P51587 DLX4-206ENST00000611342 1662 ntBASIC15.32■□□□□ 0.04
BRCA2P51587 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.32■□□□□ 0.04
BRCA2P51587 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BRCA2P51587 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BRCA2P51587 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
BRCA2P51587 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.32■□□□□ 0.04
BRCA2P51587 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRCA2P51587 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BRCA2P51587 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
BRCA2P51587 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BRCA2P51587 MIR1587-201ENST00000583319 53 ntBASIC15.32■□□□□ 0.04
BRCA2P51587 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BRCA2P51587 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BRCA2P51587 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BRCA2P51587 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC15.31■□□□□ 0.04
BRCA2P51587 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC15.31■□□□□ 0.04
BRCA2P51587 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC15.31■□□□□ 0.04
BRCA2P51587 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 AP000437.1-201ENST00000624057 2085 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 AC104581.4-201ENST00000623126 3052 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 AC011477.7-201ENST00000617163 1440 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 ACTG1P23-201ENST00000437653 1074 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.31■□□□□ 0.04
BRCA2P51587 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC15.31■□□□□ 0.04
BRCA2P51587 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 IGHV7-56-201ENST00000518372 351 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 AP003170.2-201ENST00000544730 786 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 MIR5193-201ENST00000584510 109 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 AC069061.4-201ENST00000581294 1347 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC15.31■□□□□ 0.04
BRCA2P51587 Z84721.1-201ENST00000438841 372 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.31■□□□□ 0.04
BRCA2P51587 AC008267.3-201ENST00000448776 712 ntBASIC15.31■□□□□ 0.04
BRCA2P51587 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC15.31■□□□□ 0.04
BRCA2P51587 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BRCA2P51587 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.31■□□□□ 0.04
BRCA2P51587 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
BRCA2P51587 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms