Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.08□□□□□ -0.32
NR4A2P43354 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.08□□□□□ -0.32
NR4A2P43354 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 RNA5SP412-201ENST00000516234 123 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.08□□□□□ -0.32
NR4A2P43354 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 RN7SL219P-201ENST00000582872 296 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC016694.1-201ENST00000434179 700 ntBASIC13.07□□□□□ -0.32
NR4A2P43354 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 AC093433.1-201ENST00000458048 571 ntBASIC13.07□□□□□ -0.32
NR4A2P43354 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.07□□□□□ -0.32
NR4A2P43354 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 AP000812.2-201ENST00000538934 718 ntBASIC13.07□□□□□ -0.32
NR4A2P43354 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.07□□□□□ -0.32
NR4A2P43354 AC005252.2-201ENST00000624630 1141 ntBASIC13.07□□□□□ -0.32
NR4A2P43354 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.07□□□□□ -0.32
NR4A2P43354 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NR4A2P43354 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NR4A2P43354 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NR4A2P43354 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NR4A2P43354 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms