Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 AL358472.3-201ENST00000608147 415 ntBASIC15.3■□□□□ 0.04
SSR1P43307 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC15.3■□□□□ 0.04
SSR1P43307 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 AL157996.1-201ENST00000624684 2299 ntBASIC15.3■□□□□ 0.04
SSR1P43307 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SSR1P43307 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 AC111170.3-201ENST00000624282 2464 ntBASIC15.29■□□□□ 0.04
SSR1P43307 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 AL136309.1-201ENST00000403917 691 ntBASIC15.29■□□□□ 0.04
SSR1P43307 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.29■□□□□ 0.04
SSR1P43307 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SSR1P43307 ZACNP1-201ENST00000612259 710 ntBASIC15.29■□□□□ 0.04
SSR1P43307 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.29■□□□□ 0.04
SSR1P43307 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.29■□□□□ 0.04
SSR1P43307 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
SSR1P43307 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.29■□□□□ 0.04
SSR1P43307 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.29■□□□□ 0.04
SSR1P43307 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSR1P43307 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.29■□□□□ 0.04
SSR1P43307 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.28■□□□□ 0.04
SSR1P43307 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.28■□□□□ 0.04
SSR1P43307 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.28■□□□□ 0.04
SSR1P43307 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSR1P43307 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.28■□□□□ 0.04
SSR1P43307 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
SSR1P43307 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SSR1P43307 AC006001.1-201ENST00000325130 474 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms