Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KRT18P9-201ENST00000604826 1300 ntBASIC13.13□□□□□ -0.31
RFC3P40938 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 ST20-AS1-201ENST00000560255 4223 ntBASIC13.12□□□□□ -0.31
RFC3P40938 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RFC3P40938 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 BANF1P3-201ENST00000412556 261 ntBASIC13.12□□□□□ -0.31
RFC3P40938 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.12□□□□□ -0.31
RFC3P40938 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.12□□□□□ -0.31
RFC3P40938 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 AP000358.1-201ENST00000456260 156 ntBASIC13.12□□□□□ -0.31
RFC3P40938 RN7SL530P-201ENST00000485097 298 ntBASIC13.12□□□□□ -0.31
RFC3P40938 AC022447.6-201ENST00000515522 438 ntBASIC13.12□□□□□ -0.31
RFC3P40938 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.12□□□□□ -0.31
RFC3P40938 MIR3147-201ENST00000577811 66 ntBASIC13.12□□□□□ -0.31
RFC3P40938 MIR4722-201ENST00000578292 60 ntBASIC13.12□□□□□ -0.31
RFC3P40938 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.12□□□□□ -0.31
RFC3P40938 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 SPCS2P2-201ENST00000603270 608 ntBASIC13.12□□□□□ -0.31
RFC3P40938 AC007326.1-201ENST00000604539 458 ntBASIC13.12□□□□□ -0.31
RFC3P40938 AL805961.1-201ENST00000642026 753 ntBASIC13.12□□□□□ -0.31
RFC3P40938 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 AGGF1P1-201ENST00000509500 2073 ntBASIC13.12□□□□□ -0.31
RFC3P40938 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.12□□□□□ -0.31
RFC3P40938 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.12□□□□□ -0.31
RFC3P40938 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.12□□□□□ -0.31
RFC3P40938 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RFC3P40938 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.11□□□□□ -0.31
RFC3P40938 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 RPSAP15-201ENST00000448168 861 ntBASIC13.11□□□□□ -0.31
RFC3P40938 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.11□□□□□ -0.31
RFC3P40938 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.11□□□□□ -0.31
RFC3P40938 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 AC103691.2-201ENST00000618824 433 ntBASIC13.11□□□□□ -0.31
RFC3P40938 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 AC097359.2-201ENST00000604992 2389 ntBASIC13.11□□□□□ -0.31
RFC3P40938 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 AC011498.7-201ENST00000624986 2027 ntBASIC13.11□□□□□ -0.31
RFC3P40938 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RFC3P40938 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RFC3P40938 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
RFC3P40938 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RFC3P40938 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.11□□□□□ -0.31
RFC3P40938 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms