Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
USP8P40818 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP8P40818 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP8P40818 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP8P40818 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
USP8P40818 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
USP8P40818 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 GPR53P-205ENST00000457298 1084 ntBASIC15.65■□□□□ 0.1
USP8P40818 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 AC100850.1-201ENST00000506768 649 ntBASIC15.65■□□□□ 0.1
USP8P40818 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
USP8P40818 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.65■□□□□ 0.1
USP8P40818 AC005586.2-201ENST00000563946 837 ntBASIC15.65■□□□□ 0.1
USP8P40818 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.65■□□□□ 0.1
USP8P40818 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.65■□□□□ 0.1
USP8P40818 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 AC008687.7-202ENST00000637404 953 ntBASIC15.65■□□□□ 0.1
USP8P40818 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.65■□□□□ 0.1
USP8P40818 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.65■□□□□ 0.1
USP8P40818 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP8P40818 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
USP8P40818 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 AC010141.1-201ENST00000411585 623 ntBASIC15.64■□□□□ 0.09
USP8P40818 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 HLA-V-201ENST00000429037 534 ntBASIC15.64■□□□□ 0.09
USP8P40818 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.64■□□□□ 0.09
USP8P40818 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.64■□□□□ 0.09
USP8P40818 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.64■□□□□ 0.09
USP8P40818 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.64■□□□□ 0.09
USP8P40818 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.64■□□□□ 0.09
USP8P40818 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.64■□□□□ 0.09
USP8P40818 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
USP8P40818 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.64■□□□□ 0.09
USP8P40818 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC15.64■□□□□ 0.09
USP8P40818 AC105206.1-202ENST00000314927 2368 ntBASIC15.64■□□□□ 0.09
USP8P40818 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.64■□□□□ 0.09
USP8P40818 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP8P40818 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 TCAM1P-207ENST00000485295 1537 ntBASIC15.63■□□□□ 0.09
USP8P40818 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
USP8P40818 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
USP8P40818 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.63■□□□□ 0.09
USP8P40818 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.63■□□□□ 0.09
USP8P40818 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP8P40818 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms