Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.94■□□□□ 0.14
CIITAP33076 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.94■□□□□ 0.14
CIITAP33076 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.94■□□□□ 0.14
CIITAP33076 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CIITAP33076 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.94■□□□□ 0.14
CIITAP33076 LINC02486-201ENST00000604157 3000 ntBASIC15.94■□□□□ 0.14
CIITAP33076 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CIITAP33076 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.94■□□□□ 0.14
CIITAP33076 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 TBC1D27-202ENST00000424239 1573 ntBASIC15.93■□□□□ 0.14
CIITAP33076 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.93■□□□□ 0.14
CIITAP33076 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.93■□□□□ 0.14
CIITAP33076 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 FTLP1-201ENST00000449155 526 ntBASIC15.93■□□□□ 0.14
CIITAP33076 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.93■□□□□ 0.14
CIITAP33076 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CIITAP33076 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.93■□□□□ 0.14
CIITAP33076 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.93■□□□□ 0.14
CIITAP33076 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CIITAP33076 AC084781.1-201ENST00000613737 656 ntBASIC15.93■□□□□ 0.14
CIITAP33076 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.93■□□□□ 0.14
CIITAP33076 CR392039.2-201ENST00000623182 509 ntBASIC15.93■□□□□ 0.14
CIITAP33076 AL353726.2-201ENST00000623259 884 ntBASIC15.93■□□□□ 0.14
CIITAP33076 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CIITAP33076 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CIITAP33076 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CIITAP33076 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CIITAP33076 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.92■□□□□ 0.14
CIITAP33076 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 AC008620.2-201ENST00000510294 1569 ntBASIC15.92■□□□□ 0.14
CIITAP33076 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CIITAP33076 GRK6P1-201ENST00000400595 1711 ntBASIC15.92■□□□□ 0.14
CIITAP33076 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 AL512430.1-201ENST00000392575 860 ntBASIC15.92■□□□□ 0.14
CIITAP33076 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.92■□□□□ 0.14
CIITAP33076 HLA-DMA-203ENST00000395305 777 ntBASIC15.92■□□□□ 0.14
CIITAP33076 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.92■□□□□ 0.14
CIITAP33076 FGFR3P1-201ENST00000449999 601 ntBASIC15.92■□□□□ 0.14
CIITAP33076 MIR2392-201ENST00000584881 84 ntBASIC15.92■□□□□ 0.14
CIITAP33076 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.92■□□□□ 0.14
CIITAP33076 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CIITAP33076 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.92■□□□□ 0.14
CIITAP33076 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CIITAP33076 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CIITAP33076 AGAP10P-201ENST00000454844 2418 ntBASIC15.92■□□□□ 0.14
CIITAP33076 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CIITAP33076 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.91■□□□□ 0.14
CIITAP33076 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.91■□□□□ 0.14
CIITAP33076 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CIITAP33076 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms