Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 AL512430.1-201ENST00000392575 860 ntBASIC12.05□□□□□ -0.48
COL8A2P25067 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.05□□□□□ -0.48
COL8A2P25067 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 NOC2LP1-201ENST00000450578 752 ntBASIC12.05□□□□□ -0.48
COL8A2P25067 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.05□□□□□ -0.48
COL8A2P25067 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.05□□□□□ -0.48
COL8A2P25067 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.05□□□□□ -0.48
COL8A2P25067 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.05□□□□□ -0.48
COL8A2P25067 MIR4522-201ENST00000584932 87 ntBASIC12.05□□□□□ -0.48
COL8A2P25067 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.05□□□□□ -0.48
COL8A2P25067 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.05□□□□□ -0.48
COL8A2P25067 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 AC073352.2-201ENST00000609385 439 ntBASIC12.05□□□□□ -0.48
COL8A2P25067 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.05□□□□□ -0.48
COL8A2P25067 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.05□□□□□ -0.48
COL8A2P25067 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
COL8A2P25067 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
COL8A2P25067 AC090505.1-201ENST00000430515 1834 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 CICP20-201ENST00000443330 2801 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 FXNP2-201ENST00000411625 547 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.04□□□□□ -0.48
COL8A2P25067 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.04□□□□□ -0.48
COL8A2P25067 MPRIPP1-201ENST00000452433 1089 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 FTH1P22-201ENST00000456305 520 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 AC138894.2-201ENST00000602838 371 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
COL8A2P25067 AL805961.1-201ENST00000642026 753 ntBASIC12.04□□□□□ -0.48
COL8A2P25067 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
COL8A2P25067 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
COL8A2P25067 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.04□□□□□ -0.48
COL8A2P25067 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms