Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLP19338 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 TNRC18P1-201ENST00000502875 3650 ntBASIC17.11■□□□□ 0.33
NCLP19338 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NCLP19338 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.11■□□□□ 0.33
NCLP19338 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.11■□□□□ 0.33
NCLP19338 ACA64.2-201ENST00000459014 129 ntBASIC17.11■□□□□ 0.33
NCLP19338 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.11■□□□□ 0.33
NCLP19338 KRT17P8-201ENST00000540749 863 ntBASIC17.11■□□□□ 0.33
NCLP19338 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.11■□□□□ 0.33
NCLP19338 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.11■□□□□ 0.33
NCLP19338 RPSAP52-203ENST00000622976 1023 ntBASIC17.11■□□□□ 0.33
NCLP19338 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NCLP19338 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.11■□□□□ 0.33
NCLP19338 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NCLP19338 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.11■□□□□ 0.33
NCLP19338 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCLP19338 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.1■□□□□ 0.33
NCLP19338 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 SOCS2P1-201ENST00000417727 557 ntBASIC17.1■□□□□ 0.33
NCLP19338 TLE1P1-201ENST00000422965 589 ntBASIC17.1■□□□□ 0.33
NCLP19338 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 AL359711.2-201ENST00000563105 872 ntBASIC17.1■□□□□ 0.33
NCLP19338 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 AC015936.2-201ENST00000593177 259 ntBASIC17.1■□□□□ 0.33
NCLP19338 AC010319.3-201ENST00000597028 470 ntBASIC17.1■□□□□ 0.33
NCLP19338 AC004466.1-201ENST00000599515 1080 ntBASIC17.1■□□□□ 0.33
NCLP19338 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 LINC02486-201ENST00000604157 3000 ntBASIC17.1■□□□□ 0.33
NCLP19338 KRT8P35-201ENST00000483942 1338 ntBASIC17.1■□□□□ 0.33
NCLP19338 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms