Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC106760.1-201ENST00000508690 800 ntBASIC12.13□□□□□ -0.47
HIST1H1DP16402 TDH-203ENST00000531764 1110 ntBASIC12.13□□□□□ -0.47
HIST1H1DP16402 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 MIR5189-201ENST00000577370 114 ntBASIC12.13□□□□□ -0.47
HIST1H1DP16402 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1DP16402 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
HIST1H1DP16402 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 LINC01165-201ENST00000445190 1623 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 MSNP1-201ENST00000511640 1732 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 AC010970.1-201ENST00000445125 1848 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RNA5SP486-201ENST00000515961 83 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 AL512310.5-201ENST00000551999 515 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 WASH4P-201ENST00000564273 1246 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 AC025279.2-201ENST00000569730 653 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 AL358472.3-201ENST00000608147 415 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RCC2P1-201ENST00000452257 1476 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 SALL4P6-201ENST00000429385 1691 ntBASIC12.12□□□□□ -0.47
HIST1H1DP16402 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1DP16402 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1DP16402 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms