Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.2□□□□□ -0.3
BMP4P12644 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BMP4P12644 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
BMP4P12644 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 AL031595.1-201ENST00000623969 4709 ntBASIC13.19□□□□□ -0.3
BMP4P12644 HSPA8P5-201ENST00000456928 2069 ntBASIC13.19□□□□□ -0.3
BMP4P12644 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
BMP4P12644 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.19□□□□□ -0.3
BMP4P12644 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
BMP4P12644 AC136604.1-202ENST00000425471 771 ntBASIC13.19□□□□□ -0.3
BMP4P12644 AC114812.1-204ENST00000449669 728 ntBASIC13.19□□□□□ -0.3
BMP4P12644 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.19□□□□□ -0.3
BMP4P12644 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.19□□□□□ -0.3
BMP4P12644 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.19□□□□□ -0.3
BMP4P12644 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.19□□□□□ -0.3
BMP4P12644 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 RHOXF1P1-202ENST00000635473 501 ntBASIC13.19□□□□□ -0.3
BMP4P12644 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 AL645728.2-202ENST00000641679 227 ntBASIC13.19□□□□□ -0.3
BMP4P12644 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
BMP4P12644 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BMP4P12644 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
BMP4P12644 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BMP4P12644 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 PCDHA6-201ENST00000378126 3267 ntBASIC13.18□□□□□ -0.3
BMP4P12644 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 MEX3B-202ENST00000558133 4333 ntBASIC13.18□□□□□ -0.3
BMP4P12644 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 AC092933.1-201ENST00000393644 945 ntBASIC13.18□□□□□ -0.3
BMP4P12644 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.18□□□□□ -0.3
BMP4P12644 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms