Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
APOEP02649 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
APOEP02649 CYP46A4P-201ENST00000414953 267 ntBASIC14.98□□□□□ -0.01
APOEP02649 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.98□□□□□ -0.01
APOEP02649 Z97180.1-201ENST00000445173 988 ntBASIC14.98□□□□□ -0.01
APOEP02649 AC022494.1-201ENST00000466044 728 ntBASIC14.98□□□□□ -0.01
APOEP02649 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
APOEP02649 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.98□□□□□ -0.01
APOEP02649 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 RN7SL774P-201ENST00000577467 290 ntBASIC14.98□□□□□ -0.01
APOEP02649 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
APOEP02649 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.98□□□□□ -0.01
APOEP02649 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOEP02649 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
APOEP02649 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOEP02649 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 AC079781.5-202ENST00000641784 3743 ntBASIC14.97□□□□□ -0.01
APOEP02649 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 AC089987.1-201ENST00000551654 2209 ntBASIC14.97□□□□□ -0.01
APOEP02649 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.97□□□□□ -0.01
APOEP02649 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.97□□□□□ -0.01
APOEP02649 MIR3188-201ENST00000583494 85 ntBASIC14.97□□□□□ -0.01
APOEP02649 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.97□□□□□ -0.01
APOEP02649 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.97□□□□□ -0.01
APOEP02649 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
APOEP02649 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOEP02649 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
APOEP02649 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
APOEP02649 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
APOEP02649 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.96□□□□□ -0.01
APOEP02649 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOEP02649 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.96□□□□□ -0.01
APOEP02649 AC239868.1-201ENST00000369385 493 ntBASIC14.96□□□□□ -0.01
APOEP02649 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.96□□□□□ -0.01
APOEP02649 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.96□□□□□ -0.01
APOEP02649 ACTG1P2-201ENST00000415776 1125 ntBASIC14.96□□□□□ -0.01
APOEP02649 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms