Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 ALG1L8P-201ENST00000533887 760 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 AC005586.2-201ENST00000563946 837 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.31□□□□□ -0.6
IFNA1P01562 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 TUBB3P1-201ENST00000405796 1332 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.31□□□□□ -0.6
IFNA1P01562 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.31□□□□□ -0.6
IFNA1P01562 AC012531.1-201ENST00000562848 2680 ntBASIC11.31□□□□□ -0.6
IFNA1P01562 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
IFNA1P01562 AC012313.8-201ENST00000595059 5402 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
IFNA1P01562 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 PCDHA9-201ENST00000378122 6900 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 AC004832.2-201ENST00000426397 482 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 ADH5P3-201ENST00000433842 1137 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 IGHV3-22-201ENST00000520721 359 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.3□□□□□ -0.6
IFNA1P01562 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.3□□□□□ -0.6
IFNA1P01562 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
IFNA1P01562 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.3□□□□□ -0.6
IFNA1P01562 AL513190.1-201ENST00000621254 727 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
IFNA1P01562 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.3□□□□□ -0.6
IFNA1P01562 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 AL138799.1-201ENST00000448213 1675 ntBASIC11.3□□□□□ -0.6
IFNA1P01562 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
IFNA1P01562 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.29□□□□□ -0.6
IFNA1P01562 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
IFNA1P01562 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.29□□□□□ -0.6
IFNA1P01562 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms