Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.34□□□□□ -0.11
RFPL1O75677 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RFPL1O75677 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RFPL1O75677 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RFPL1O75677 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.34□□□□□ -0.11
RFPL1O75677 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.34□□□□□ -0.11
RFPL1O75677 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 AC136604.1-202ENST00000425471 771 ntBASIC14.34□□□□□ -0.11
RFPL1O75677 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.34□□□□□ -0.11
RFPL1O75677 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.34□□□□□ -0.11
RFPL1O75677 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 AC073413.1-201ENST00000603927 732 ntBASIC14.34□□□□□ -0.11
RFPL1O75677 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.34□□□□□ -0.11
RFPL1O75677 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.34□□□□□ -0.11
RFPL1O75677 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RFPL1O75677 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RFPL1O75677 ABCD1P2-201ENST00000429313 1601 ntBASIC14.33□□□□□ -0.11
RFPL1O75677 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.33□□□□□ -0.11
RFPL1O75677 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFPL1O75677 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RFPL1O75677 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.33□□□□□ -0.11
RFPL1O75677 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RFPL1O75677 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RFPL1O75677 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.33□□□□□ -0.11
RFPL1O75677 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RFPL1O75677 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 MIR1202-201ENST00000408529 83 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 AC010141.1-201ENST00000411585 623 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 AL591846.1-201ENST00000451736 433 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 IGHJ2P-201ENST00000454480 60 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.33□□□□□ -0.12
RFPL1O75677 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.33□□□□□ -0.12
RFPL1O75677 RHOQP1-201ENST00000555758 579 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.33□□□□□ -0.12
RFPL1O75677 EEF1DP1-201ENST00000585891 896 ntBASIC14.33□□□□□ -0.12
RFPL1O75677 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RFPL1O75677 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
RFPL1O75677 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RFPL1O75677 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
RFPL1O75677 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms