Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 MYADML-201ENST00000474610 2147 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 NAA10-205ENST00000393712 908 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 PTPA-219ENST00000435305 530 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC012066.1-201ENST00000439252 694 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC012513.2-201ENST00000441511 1137 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AL137077.1-201ENST00000442115 528 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC010997.1-201ENST00000447646 350 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 CHCHD2P6-201ENST00000454346 447 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 RPL3P9-201ENST00000463217 1183 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 RN7SL638P-201ENST00000494527 290 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 FOS-205ENST00000555242 629 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AL590824.1-201ENST00000403828 1349 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC215219.1-201ENST00000400706 1817 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC136621.1-201ENST00000624017 2304 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 FTLP3-201ENST00000427242 528 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 KRT18P15-201ENST00000458108 1291 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 MIR4326-201ENST00000582203 59 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AC063977.2-201ENST00000601996 421 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AC022382.1-201ENST00000602768 336 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AL078624.1-201ENST00000604004 547 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 AL139158.3-201ENST00000641212 1562 ntBASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM88BA6NKF7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 IMPDH1P5-201ENST00000439688 1540 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 AL031577.1-201ENST00000339867 399 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 SERPINB8P1-201ENST00000401898 377 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 AC105443.1-201ENST00000433754 712 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 RN7SL340P-201ENST00000470792 296 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms