Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 EIF3FP3-201ENST00000434851 1086 ntBASIC12.68□□□□□ -0.38
DUX4Q9UBX2 U91328.1-201ENST00000437528 223 ntBASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 CR383656.12-201ENST00000549567 513 ntBASIC12.68□□□□□ -0.38
DUX4Q9UBX2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FAM95B1-212ENST00000592873 4692 ntBASIC12.68□□□□□ -0.38
DUX4Q9UBX2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DUX4Q9UBX2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 GOLGA8CP-201ENST00000446144 5237 ntBASIC12.67□□□□□ -0.38
DUX4Q9UBX2 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AL118506.1-201ENST00000601296 3082 ntBASIC12.67□□□□□ -0.38
DUX4Q9UBX2 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 GNRHR2-203ENST00000581100 1187 ntBASIC12.67□□□□□ -0.38
DUX4Q9UBX2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DUX4Q9UBX2 AC015936.2-201ENST00000593177 259 ntBASIC12.67□□□□□ -0.38
DUX4Q9UBX2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms