Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RN7SL837P-201ENST00000463010 287 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC078819.1-201ENST00000547454 765 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC012085.1-201ENST00000548270 765 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AL096865.1-201ENST00000606796 927 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AL136301.1-201ENST00000615830 422 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC138951.2-201ENST00000623455 1161 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.08□□□□□ -0.47
HDHD3Q9BSH5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.08□□□□□ -0.47
HDHD3Q9BSH5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
HDHD3Q9BSH5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
HDHD3Q9BSH5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MIR326-201ENST00000362220 95 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC005229.1-201ENST00000392885 409 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AP006294.1-201ENST00000415407 339 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 FTH1P14-201ENST00000482930 551 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 SPCS2P1-201ENST00000561636 679 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MIR4745-201ENST00000577608 62 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 AL008718.2-201ENST00000609206 1313 ntBASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HDHD3Q9BSH5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HDHD3Q9BSH5 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms