Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 RN7SKP214-201ENST00000364208 315 ntBASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 RPS2P32-201ENST00000439199 892 ntBASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AL359881.2-201ENST00000602973 570 ntBASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDLIM5Q96HC4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 KRT8P21-201ENST00000430398 1491 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 FMO6P-201ENST00000236166 1620 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 RPS9P1-201ENST00000419943 583 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 NKAIN1P1-201ENST00000435754 582 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC104306.2-201ENST00000451877 341 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 RN7SL277P-201ENST00000481521 288 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 RCC2P8-201ENST00000502779 1035 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC044849.1-201ENST00000519737 1188 ntBASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms