Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.27□□□□□ -0.29
HPS1Q92902 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HPS1Q92902 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.27□□□□□ -0.29
HPS1Q92902 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.26□□□□□ -0.29
HPS1Q92902 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HPS1Q92902 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HPS1Q92902 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 TOMM22P5-201ENST00000416399 439 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.26□□□□□ -0.29
HPS1Q92902 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.26□□□□□ -0.29
HPS1Q92902 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC13.26□□□□□ -0.29
HPS1Q92902 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 AL589987.1-201ENST00000453380 819 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 USP9YP2-201ENST00000504503 1000 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 USP9YP1-201ENST00000513521 1002 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 AOC4P-203ENST00000566825 2289 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 AC036164.1-201ENST00000570544 333 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.26□□□□□ -0.29
HPS1Q92902 CTBP2P3-201ENST00000585629 1255 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.26□□□□□ -0.29
HPS1Q92902 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 MIR8072-201ENST00000614241 80 ntBASIC13.26□□□□□ -0.29
HPS1Q92902 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HPS1Q92902 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HPS1Q92902 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HPS1Q92902 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.25□□□□□ -0.29
HPS1Q92902 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HPS1Q92902 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HPS1Q92902 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.25□□□□□ -0.29
HPS1Q92902 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.25□□□□□ -0.29
HPS1Q92902 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HPS1Q92902 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
HPS1Q92902 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.25□□□□□ -0.29
HPS1Q92902 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HPS1Q92902 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HPS1Q92902 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HPS1Q92902 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.25□□□□□ -0.29
HPS1Q92902 AL133267.1-201ENST00000398220 340 ntBASIC13.25□□□□□ -0.29
HPS1Q92902 BOLA2P3-201ENST00000404566 256 ntBASIC13.25□□□□□ -0.29
HPS1Q92902 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC13.25□□□□□ -0.29
HPS1Q92902 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms