Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 AC009093.2-202ENST00000620513 2079 ntBASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 FAM90A12P-201ENST00000519497 2375 ntBASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 FAM90A24P-201ENST00000520792 2369 ntBASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CFAP61Q8NHU2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
CFAP61Q8NHU2 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 OR8S1-201ENST00000310194 1080 ntBASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AP000812.2-201ENST00000538934 718 ntBASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AC138696.2-201ENST00000607376 223 ntBASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AC133552.6-201ENST00000613406 534 ntBASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CFAP61Q8NHU2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 KRT8P4-201ENST00000509735 1454 ntBASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 GK-202ENST00000378941 458 ntTSL 3 BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CFAP61Q8NHU2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms