Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.4□□□□□ -0.42
BEST4Q8NFU0 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
BEST4Q8NFU0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.4□□□□□ -0.43
BEST4Q8NFU0 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
BEST4Q8NFU0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
BEST4Q8NFU0 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 TUBB8P4-201ENST00000511806 1324 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 LRRC59-203ENST00000576448 1531 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC241585.1-201ENST00000433527 519 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 EIF3FP3-201ENST00000434851 1086 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC067863.1-201ENST00000494933 530 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AP001582.1-201ENST00000525856 295 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC135586.1-201ENST00000539323 574 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC004449.1-201ENST00000564240 433 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC138761.1-201ENST00000584393 385 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC015911.4-201ENST00000588022 1070 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 AC012531.1-201ENST00000562848 2680 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.39□□□□□ -0.43
BEST4Q8NFU0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BEST4Q8NFU0 INTS4P2-202ENST00000614726 2019 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 KLF2P2-201ENST00000416807 1039 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 TREML5P-201ENST00000421694 576 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC134915.1-201ENST00000426461 574 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms