Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMG6Q86US8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMG6Q86US8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMG6Q86US8 MIR645-201ENST00000385283 94 ntBASIC19.3■□□□□ 0.68
SMG6Q86US8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.3■□□□□ 0.68
SMG6Q86US8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.3■□□□□ 0.68
SMG6Q86US8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.3■□□□□ 0.68
SMG6Q86US8 AC009560.1-201ENST00000620208 434 ntBASIC19.3■□□□□ 0.68
SMG6Q86US8 AC005618.3-201ENST00000624928 458 ntBASIC19.3■□□□□ 0.68
SMG6Q86US8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SMG6Q86US8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC19.3■□□□□ 0.68
SMG6Q86US8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMG6Q86US8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC19.3■□□□□ 0.68
SMG6Q86US8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMG6Q86US8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SMG6Q86US8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SMG6Q86US8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SMG6Q86US8 KRT17P5-201ENST00000332088 839 ntBASIC19.29■□□□□ 0.68
SMG6Q86US8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.29■□□□□ 0.68
SMG6Q86US8 MRPL22P1-201ENST00000505398 616 ntBASIC19.29■□□□□ 0.68
SMG6Q86US8 CTBP2P4-201ENST00000513884 920 ntBASIC19.29■□□□□ 0.68
SMG6Q86US8 IGHV3-37-201ENST00000518544 340 ntBASIC19.29■□□□□ 0.68
SMG6Q86US8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.29■□□□□ 0.68
SMG6Q86US8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMG6Q86US8 AC015909.5-201ENST00000624336 2266 ntBASIC19.29■□□□□ 0.68
SMG6Q86US8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMG6Q86US8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SMG6Q86US8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.29■□□□□ 0.68
SMG6Q86US8 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
SMG6Q86US8 AL355334.1-201ENST00000417713 215 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 AL512306.1-201ENST00000432698 848 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.28■□□□□ 0.68
SMG6Q86US8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.28■□□□□ 0.68
SMG6Q86US8 TMCO5B-205ENST00000530020 894 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.28■□□□□ 0.68
SMG6Q86US8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SMG6Q86US8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.28■□□□□ 0.68
SMG6Q86US8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.28■□□□□ 0.68
SMG6Q86US8 AC084781.1-201ENST00000613737 656 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 AC073911.3-201ENST00000624401 631 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.28■□□□□ 0.68
SMG6Q86US8 CCT8L1P-201ENST00000465400 1674 ntBASIC19.28■□□□□ 0.68
SMG6Q86US8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMG6Q86US8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMG6Q86US8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.28■□□□□ 0.68
SMG6Q86US8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMG6Q86US8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMG6Q86US8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMG6Q86US8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMG6Q86US8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMG6Q86US8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMG6Q86US8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SMG6Q86US8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMG6Q86US8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.27■□□□□ 0.68
SMG6Q86US8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms