Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Z82244.2-201ENST00000632196 448 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 AL139158.3-201ENST00000641212 1562 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.44□□□□□ -0.58
VPS13CQ709C8 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 ACTBP14-201ENST00000411655 1089 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 DNM1P46-202ENST00000415963 882 ntBASIC11.44□□□□□ -0.58
VPS13CQ709C8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VPS13CQ709C8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AP000437.1-201ENST00000624057 2085 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC079325.1-201ENST00000430386 857 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC008021.1-201ENST00000474180 414 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 RNF7-205ENST00000480908 782 ntTSL 4 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC127002.1-201ENST00000619123 455 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AL590556.2-202ENST00000636906 844 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AP000533.1-201ENST00000456143 1177 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC139100.2-201ENST00000616901 662 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 MEP1AP1-201ENST00000636082 1097 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 WDR54-202ENST00000409791 854 ntTSL 3 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 OR7E155P-201ENST00000412208 1014 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 SDCBP2P1-201ENST00000416115 614 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 RBMX2P5-201ENST00000424312 969 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 NDUFB2P1-201ENST00000506966 295 ntBASIC11.43□□□□□ -0.58
VPS13CQ709C8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC11.43□□□□□ -0.58
VPS13CQ709C8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VPS13CQ709C8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 MIR181D-201ENST00000384853 137 ntBASIC11.42□□□□□ -0.58
VPS13CQ709C8 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 AC010086.2-201ENST00000428616 226 ntBASIC11.42□□□□□ -0.58
VPS13CQ709C8 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 TPST2P1-201ENST00000564073 1102 ntBASIC11.42□□□□□ -0.58
VPS13CQ709C8 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VPS13CQ709C8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
VPS13CQ709C8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms