Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 AL627223.1-201ENST00000416693 442 ntBASIC13.46□□□□□ -0.25
LPCAT4Q643R3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 AC027237.1-201ENST00000560942 655 ntBASIC13.46□□□□□ -0.25
LPCAT4Q643R3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 LINC02084-201ENST00000606069 1096 ntBASIC13.46□□□□□ -0.25
LPCAT4Q643R3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 CR392039.2-201ENST00000623182 509 ntBASIC13.46□□□□□ -0.25
LPCAT4Q643R3 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LPCAT4Q643R3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LPCAT4Q643R3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC011700.1-201ENST00000610409 2627 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC008764.8-201ENST00000623966 2717 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC020910.5-201ENST00000623668 1865 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 RNU1-114P-201ENST00000365297 166 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 CEND1P1-201ENST00000451006 455 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 TIMM17BP1-201ENST00000545713 516 ntBASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LPCAT4Q643R3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms