Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 MEP1AP4-201ENST00000423244 1087 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 RN7SL399P-201ENST00000471648 279 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC023310.3-201ENST00000557027 670 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC103988.2-201ENST00000561804 725 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC100756.1-201ENST00000562736 682 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC138749.3-201ENST00000567691 622 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC027796.2-201ENST00000575326 344 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SPDYE22P-201ENST00000582158 798 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC138761.1-201ENST00000584393 385 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC116165.1-201ENST00000611806 668 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 AP000437.1-201ENST00000624057 2085 ntBASIC11.42□□□□□ -0.58
FAM78BQ5VT40 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
FAM78BQ5VT40 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 MIR770-201ENST00000390219 98 ntBASIC11.41□□□□□ -0.58
FAM78BQ5VT40 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 GNAQP1-201ENST00000444815 1067 ntBASIC11.41□□□□□ -0.58
FAM78BQ5VT40 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.41□□□□□ -0.58
FAM78BQ5VT40 GCOM2-201ENST00000509133 1104 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms