Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 KRT8P28-201ENST00000433288 1390 ntBASIC11.61□□□□□ -0.55
BSXQ3C1V8 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 AL138709.1-201ENST00000614840 1693 ntBASIC11.61□□□□□ -0.55
BSXQ3C1V8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.61□□□□□ -0.55
BSXQ3C1V8 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BSXQ3C1V8 PTPRVP-205ENST00000641549 5067 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AL445209.1-201ENST00000607269 3491 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AL161932.2-201ENST00000435436 679 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC012441.1-201ENST00000446669 685 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 INGX-202ENST00000489074 768 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 WFDC1-204ENST00000613603 549 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC145423.3-201ENST00000615987 467 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 AC009093.10-201ENST00000641956 1442 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 AL157996.1-201ENST00000624684 2299 ntBASIC11.6□□□□□ -0.55
BSXQ3C1V8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
BSXQ3C1V8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
BSXQ3C1V8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.59□□□□□ -0.55
BSXQ3C1V8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.59□□□□□ -0.55
BSXQ3C1V8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
BSXQ3C1V8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
BSXQ3C1V8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.59□□□□□ -0.55
BSXQ3C1V8 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BSXQ3C1V8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms