Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC011474.4-201ENST00000623523 2076 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC124068.2-201ENST00000569473 1109 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 RN7SL665P-201ENST00000578793 300 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AP005212.2-201ENST00000584979 510 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 TMEM14EP-202ENST00000639378 1296 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 AC006372.4-201ENST00000624122 1543 ntBASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CTC1Q2NKJ3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 CTBP2P8-201ENST00000422584 1330 ntBASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CTC1Q2NKJ3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTC1Q2NKJ3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 AP002353.1-201ENST00000528257 1599 ntBASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.2■□□□□ 0.02
CTC1Q2NKJ3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms