Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 Z69890.1-201ENST00000382990 339 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 LYPLA2P1-203ENST00000447689 696 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AC018463.1-201ENST00000456674 917 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 RNA5SP417-201ENST00000516459 108 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AC005041.3-201ENST00000606287 649 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 AP000322.3-201ENST00000608665 388 ntBASIC19.2■□□□□ 0.66
CGNL1Q0VF96 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CGNL1Q0VF96 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC027601.5-201ENST00000624065 2482 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 RN7SKP109-201ENST00000410592 316 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 RPL13AP19-201ENST00000434320 584 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 RN7SL564P-201ENST00000496309 250 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC007952.4-201ENST00000573866 637 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 MIR4265-201ENST00000582152 99 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC105137.3-201ENST00000617588 984 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC073911.3-201ENST00000624401 631 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 TBC1D27-202ENST00000424239 1573 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 AC019109.1-201ENST00000401725 1874 ntBASIC19.19■□□□□ 0.66
CGNL1Q0VF96 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CGNL1Q0VF96 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 RN7SL767P-201ENST00000493013 295 ntBASIC19.18■□□□□ 0.66
CGNL1Q0VF96 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 RN7SL470P-201ENST00000583069 259 ntBASIC19.18■□□□□ 0.66
CGNL1Q0VF96 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.18■□□□□ 0.66
CGNL1Q0VF96 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms