Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC007663.3-201ENST00000609632 465 ntBASIC13.79□□□□□ -0.2
PCDH1Q08174 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.79□□□□□ -0.2
PCDH1Q08174 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 RCC2P1-201ENST00000452257 1476 ntBASIC13.79□□□□□ -0.2
PCDH1Q08174 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDH1Q08174 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDH1Q08174 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PCDH1Q08174 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PCDH1Q08174 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDH1Q08174 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDH1Q08174 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDH1Q08174 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDH1Q08174 RPS2P32-201ENST00000439199 892 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
PCDH1Q08174 AC090164.2-201ENST00000611487 516 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 AC005695.3-201ENST00000614522 232 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 AL136295.7-201ENST00000619226 1200 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 AL590824.1-201ENST00000403828 1349 ntBASIC13.78□□□□□ -0.2
PCDH1Q08174 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PCDH1Q08174 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDH1Q08174 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCDH1Q08174 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDH1Q08174 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
PCDH1Q08174 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
PCDH1Q08174 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.77□□□□□ -0.2
PCDH1Q08174 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDH1Q08174 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.77□□□□□ -0.21
PCDH1Q08174 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
PCDH1Q08174 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PCDH1Q08174 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 AC011742.3-201ENST00000439053 820 ntBASIC13.77□□□□□ -0.21
PCDH1Q08174 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDH1Q08174 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.77□□□□□ -0.21
PCDH1Q08174 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDH1Q08174 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms