Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX3P78415 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IRX3P78415 AC099521.3-201ENST00000624251 2938 ntBASIC16.68■□□□□ 0.26
IRX3P78415 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IRX3P78415 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX3P78415 ST20-AS1-201ENST00000560255 4223 ntBASIC16.68■□□□□ 0.26
IRX3P78415 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IRX3P78415 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IRX3P78415 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 CICP17-201ENST00000418553 2377 ntBASIC16.67■□□□□ 0.26
IRX3P78415 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 MIR645-201ENST00000385283 94 ntBASIC16.67■□□□□ 0.26
IRX3P78415 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.67■□□□□ 0.26
IRX3P78415 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.67■□□□□ 0.26
IRX3P78415 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.67■□□□□ 0.26
IRX3P78415 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IRX3P78415 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.67■□□□□ 0.26
IRX3P78415 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
IRX3P78415 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IRX3P78415 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IRX3P78415 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 OR8T1P-201ENST00000421347 918 ntBASIC16.66■□□□□ 0.26
IRX3P78415 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.66■□□□□ 0.26
IRX3P78415 ALG1L6P-201ENST00000515248 758 ntBASIC16.66■□□□□ 0.26
IRX3P78415 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.66■□□□□ 0.26
IRX3P78415 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.66■□□□□ 0.26
IRX3P78415 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.66■□□□□ 0.26
IRX3P78415 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.66■□□□□ 0.26
IRX3P78415 SIGLEC22P-201ENST00000599104 714 ntBASIC16.66■□□□□ 0.26
IRX3P78415 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.66■□□□□ 0.26
IRX3P78415 AC005041.3-201ENST00000606287 649 ntBASIC16.66■□□□□ 0.26
IRX3P78415 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.66■□□□□ 0.26
IRX3P78415 MIR6756-201ENST00000616240 63 ntBASIC16.66■□□□□ 0.26
IRX3P78415 AC090386.2-201ENST00000623010 1039 ntBASIC16.66■□□□□ 0.26
IRX3P78415 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms